BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037D06SP1|AL430384
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1734 1770 0.0
>3x_Contig1734
Length = 17938
Score = 1770 bits (892), Expect = 0.0
Identities = 896/898 (99%)
Strand = Plus / Plus
Query: 1 aggctagctttgaaataaattgatctgaaataggtggattccatttcttggtgtgaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aggctagctttgaaataaattgatctgaaataggtggattccatttcttggtgtgaatat 419
Query: 61 gcaaaattttatctctagccttcaagtctggtagagggaaatagaactcacggtcaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gcaaaattttatctctagccttcaagtctggtagagggaaatagaactcacggtcaaatc 479
Query: 121 tacctggtcttcttaaagcaggatccactgcatctggtctattcgtagcaccgattatma 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 480 tacctggtcttcttaaagcaggatccactgcatctggtctattcgtagcaccgattataa 539
Query: 181 taatctgacctctattatccataccatccatcaatgccaacattgtcgacacgatactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 taatctgacctctattatccataccatccatcaatgccaacattgtcgacacgatactgg 599
Query: 241 catggatttgttcctgtttggaagatctaactggagccaacccatcaatttcatcaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 catggatttgttcctgtttggaagatctaactggagccaacccatcaatttcatcaaaga 659
Query: 301 aaatgattgccggttgatgtttctttgcttcttcaaacaataaccttaattgtctttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aaatgattgccggttgatgtttctttgcttcttcaaacaataaccttaattgtctttcag 719
Query: 361 cttcaccaacccatttggaaagaatgtcagcacccttcctcatgaagaaagtgatctttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cttcaccaacccatttggaaagaatgtcagcacccttcctcatgaagaaagtgatctttc 779
Query: 421 tcttctcatttgagcaacttgcggccaatgctctagccatcaaagtcttacctgtacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcttctcatttgagcaacttgcggccaatgctctagccatcaaagtcttacctgtacctg 839
Query: 481 gtgggccatggaacaagacaccacgaggtggagtaatattgaagttttgataaagttctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 gtgggccatggaacaagacaccacgaggtggagtaatattgaagttttgataaagttctg 899
Query: 541 ggtacaacaatggcaatgccaccatctcctttaattggtcaatgtagttatctagaccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ggtacaacaatggcaatgccaccatctcctttaattggtcaatgtagttatctagaccac 959
Query: 601 cgacatcatcaaaattaatgttcatatcgacaccaagtgggtccaaatctgcaatttccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 cgacatcatcaaaattaatgttcatatcgacaccaagtgggtccaaatctgcaatttccg 1019
Query: 661 gtttctttttcttcttttgttttgatggatcctttggtttcggtttcatacccaaaggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1020 gtttctttttcttcttttgttttgatggatcctttggtttcggtttcatacccaaagcta 1079
Query: 721 agatttcgtcatcggatgaatcagaatccaaaaatttgtttgactgttcgtttagagcgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 agatttcgtcatcggatgaatcagaatccaaaaatttgtttgactgttcgtttagagcgt 1139
Query: 781 ttggattagagttgtagaattgaacgtttttaccaaatatcgccgtaacatcgtttccac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 ttggattagagttgtagaattgaacgtttttaccaaatatcgccgtaacatcgtttccac 1199
Query: 841 caaatggaccaccggtagggaataaccttctaataggtccaaaactttgacccgaatg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 caaatggaccaccggtagggaataaccttctaataggtccaaaactttgacccgaatg 1257
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8471
Number of Sequences: 1807
Number of extensions: 8471
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)